Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Cldn1O88551 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.79■□□□□ 0.12
Cldn1O88551 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Cldn1O88551 Mir1199-201ENSMUST00000117015 119 ntBASIC15.79■□□□□ 0.12
Cldn1O88551 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cldn1O88551 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cldn1O88551 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldn1O88551 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cldn1O88551 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cldn1O88551 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.78■□□□□ 0.12
Cldn1O88551 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cldn1O88551 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.78■□□□□ 0.12
Cldn1O88551 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldn1O88551 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.77■□□□□ 0.12
Cldn1O88551 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldn1O88551 Gm2399-201ENSMUST00000104944 225 ntBASIC15.77■□□□□ 0.12
Cldn1O88551 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldn1O88551 Gm15378-201ENSMUST00000121894 207 ntBASIC15.77■□□□□ 0.12
Cldn1O88551 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldn1O88551 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.77■□□□□ 0.12
Cldn1O88551 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldn1O88551 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.77■□□□□ 0.12
Cldn1O88551 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldn1O88551 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldn1O88551 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldn1O88551 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Cldn1O88551 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.76■□□□□ 0.11
Cldn1O88551 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.76■□□□□ 0.11
Cldn1O88551 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.76■□□□□ 0.11
Cldn1O88551 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.76■□□□□ 0.11
Cldn1O88551 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.76■□□□□ 0.11
Cldn1O88551 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cldn1O88551 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cldn1O88551 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.76■□□□□ 0.11
Cldn1O88551 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Cldn1O88551 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Cldn1O88551 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Gm44549-201ENSMUST00000208351 577 ntBASIC15.75■□□□□ 0.11
Cldn1O88551 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.75■□□□□ 0.11
Cldn1O88551 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.75■□□□□ 0.11
Cldn1O88551 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cldn1O88551 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cldn1O88551 Golph3-202ENSMUST00000226517 2359 ntBASIC15.75■□□□□ 0.11
Cldn1O88551 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cldn1O88551 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.74■□□□□ 0.11
Cldn1O88551 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.74■□□□□ 0.11
Cldn1O88551 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cldn1O88551 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cldn1O88551 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms