Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tulp3O88413 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.24■□□□□ 0.35
Tulp3O88413 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tulp3O88413 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Tulp3O88413 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.23■□□□□ 0.35
Tulp3O88413 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tulp3O88413 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tulp3O88413 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.22■□□□□ 0.35
Tulp3O88413 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.22■□□□□ 0.35
Tulp3O88413 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tulp3O88413 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tulp3O88413 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tulp3O88413 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tulp3O88413 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tulp3O88413 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tulp3O88413 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tulp3O88413 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.21■□□□□ 0.35
Tulp3O88413 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.21■□□□□ 0.35
Tulp3O88413 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.21■□□□□ 0.35
Tulp3O88413 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tulp3O88413 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.21■□□□□ 0.35
Tulp3O88413 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.21■□□□□ 0.34
Tulp3O88413 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tulp3O88413 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Tulp3O88413 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tulp3O88413 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tulp3O88413 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tulp3O88413 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tulp3O88413 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tulp3O88413 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tulp3O88413 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tulp3O88413 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tulp3O88413 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Tulp3O88413 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Tulp3O88413 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Tulp3O88413 Gm43137-201ENSMUST00000198052 594 ntBASIC17.18■□□□□ 0.34
Tulp3O88413 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.18■□□□□ 0.34
Tulp3O88413 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tulp3O88413 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms