Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.39■□□□□ 0.86
IkbkbO88351 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IkbkbO88351 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.39■□□□□ 0.86
IkbkbO88351 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IkbkbO88351 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
IkbkbO88351 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.39■□□□□ 0.85
IkbkbO88351 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.39■□□□□ 0.85
IkbkbO88351 Mir5133-201ENSMUST00000174955 77 ntBASIC20.39■□□□□ 0.85
IkbkbO88351 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.39■□□□□ 0.85
IkbkbO88351 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IkbkbO88351 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.38■□□□□ 0.85
IkbkbO88351 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.38■□□□□ 0.85
IkbkbO88351 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.38■□□□□ 0.85
IkbkbO88351 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.38■□□□□ 0.85
IkbkbO88351 Gm6365-201ENSMUST00000054711 744 ntBASIC20.38■□□□□ 0.85
IkbkbO88351 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.38■□□□□ 0.85
IkbkbO88351 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IkbkbO88351 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IkbkbO88351 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IkbkbO88351 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IkbkbO88351 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IkbkbO88351 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.37■□□□□ 0.85
IkbkbO88351 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IkbkbO88351 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IkbkbO88351 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.36■□□□□ 0.85
IkbkbO88351 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
IkbkbO88351 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IkbkbO88351 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
IkbkbO88351 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IkbkbO88351 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.35■□□□□ 0.85
IkbkbO88351 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IkbkbO88351 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.35■□□□□ 0.85
IkbkbO88351 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IkbkbO88351 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.35■□□□□ 0.85
IkbkbO88351 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IkbkbO88351 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
IkbkbO88351 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IkbkbO88351 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IkbkbO88351 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
IkbkbO88351 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IkbkbO88351 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
IkbkbO88351 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.34■□□□□ 0.85
IkbkbO88351 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.34■□□□□ 0.85
IkbkbO88351 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IkbkbO88351 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
IkbkbO88351 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.34■□□□□ 0.85
IkbkbO88351 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IkbkbO88351 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IkbkbO88351 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IkbkbO88351 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IkbkbO88351 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IkbkbO88351 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.33■□□□□ 0.85
IkbkbO88351 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.33■□□□□ 0.85
IkbkbO88351 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
IkbkbO88351 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IkbkbO88351 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.33■□□□□ 0.84
IkbkbO88351 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
IkbkbO88351 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IkbkbO88351 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
IkbkbO88351 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IkbkbO88351 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IkbkbO88351 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IkbkbO88351 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IkbkbO88351 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IkbkbO88351 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IkbkbO88351 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IkbkbO88351 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IkbkbO88351 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.31■□□□□ 0.84
IkbkbO88351 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms