Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
Cdh16O88338 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh16O88338 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cdh16O88338 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.08■□□□□ 0.48
Cdh16O88338 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Cdh16O88338 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Cdh16O88338 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cdh16O88338 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh16O88338 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cdh16O88338 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh16O88338 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.08■□□□□ 0.48
Cdh16O88338 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cdh16O88338 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.07■□□□□ 0.48
Cdh16O88338 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.07■□□□□ 0.48
Cdh16O88338 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh16O88338 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdh16O88338 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cdh16O88338 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Cdh16O88338 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.06■□□□□ 0.48
Cdh16O88338 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh16O88338 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.05■□□□□ 0.48
Cdh16O88338 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh16O88338 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdh16O88338 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cdh16O88338 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh16O88338 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Cdh16O88338 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh16O88338 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh16O88338 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh16O88338 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdh16O88338 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh16O88338 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh16O88338 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh16O88338 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh16O88338 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdh16O88338 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh16O88338 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Cdh16O88338 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh16O88338 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.02■□□□□ 0.48
Cdh16O88338 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh16O88338 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh16O88338 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Cdh16O88338 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh16O88338 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh16O88338 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh16O88338 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh16O88338 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh16O88338 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.02■□□□□ 0.47
Cdh16O88338 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh16O88338 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdh16O88338 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdh16O88338 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh16O88338 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.01■□□□□ 0.47
Cdh16O88338 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms