Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pfdn2O70591 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.34■□□□□ 0.05
Pfdn2O70591 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.34■□□□□ 0.05
Pfdn2O70591 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pfdn2O70591 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pfdn2O70591 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pfdn2O70591 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pfdn2O70591 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pfdn2O70591 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.33■□□□□ 0.05
Pfdn2O70591 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pfdn2O70591 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pfdn2O70591 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.33■□□□□ 0.05
Pfdn2O70591 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pfdn2O70591 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.33■□□□□ 0.04
Pfdn2O70591 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.33■□□□□ 0.04
Pfdn2O70591 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Pfdn2O70591 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pfdn2O70591 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.33■□□□□ 0.04
Pfdn2O70591 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.33■□□□□ 0.04
Pfdn2O70591 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pfdn2O70591 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.33■□□□□ 0.04
Pfdn2O70591 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn2O70591 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn2O70591 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn2O70591 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.32■□□□□ 0.04
Pfdn2O70591 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.32■□□□□ 0.04
Pfdn2O70591 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pfdn2O70591 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.32■□□□□ 0.04
Pfdn2O70591 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn2O70591 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn2O70591 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pfdn2O70591 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Pfdn2O70591 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Gm22238-201ENSMUST00000175222 88 ntBASIC15.31■□□□□ 0.04
Pfdn2O70591 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pfdn2O70591 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pfdn2O70591 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pfdn2O70591 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pfdn2O70591 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.3■□□□□ 0.04
Pfdn2O70591 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pfdn2O70591 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pfdn2O70591 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.29■□□□□ 0.04
Pfdn2O70591 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pfdn2O70591 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfdn2O70591 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pfdn2O70591 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pfdn2O70591 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.28■□□□□ 0.04
Pfdn2O70591 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Pfdn2O70591 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms