Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pdlim3O70209 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim3O70209 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.73■□□□□ 0.27
Pdlim3O70209 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pdlim3O70209 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Gm12251-201ENSMUST00000117893 792 ntBASIC16.73■□□□□ 0.27
Pdlim3O70209 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.73■□□□□ 0.27
Pdlim3O70209 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pdlim3O70209 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.73■□□□□ 0.27
Pdlim3O70209 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim3O70209 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pdlim3O70209 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.72■□□□□ 0.27
Pdlim3O70209 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.72■□□□□ 0.27
Pdlim3O70209 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pdlim3O70209 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim3O70209 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Pdlim3O70209 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim3O70209 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pdlim3O70209 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.7■□□□□ 0.26
Pdlim3O70209 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pdlim3O70209 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.7■□□□□ 0.26
Pdlim3O70209 Gm11421-201ENSMUST00000122124 294 ntBASIC16.7■□□□□ 0.26
Pdlim3O70209 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.7■□□□□ 0.26
Pdlim3O70209 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.7■□□□□ 0.26
Pdlim3O70209 Gm9847-201ENSMUST00000052528 599 ntBASIC16.7■□□□□ 0.26
Pdlim3O70209 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim3O70209 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.69■□□□□ 0.26
Pdlim3O70209 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.69■□□□□ 0.26
Pdlim3O70209 Gm27801-201ENSMUST00000184174 223 ntBASIC16.69■□□□□ 0.26
Pdlim3O70209 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pdlim3O70209 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pdlim3O70209 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pdlim3O70209 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms