Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Ldb2O55203 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb2O55203 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Ldb2O55203 Gm7291-201ENSMUST00000199147 382 ntBASIC18.36■□□□□ 0.53
Ldb2O55203 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.36■□□□□ 0.53
Ldb2O55203 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.36■□□□□ 0.53
Ldb2O55203 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.36■□□□□ 0.53
Ldb2O55203 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb2O55203 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Gm29257-201ENSMUST00000186115 639 ntBASIC18.35■□□□□ 0.53
Ldb2O55203 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.35■□□□□ 0.53
Ldb2O55203 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ldb2O55203 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ldb2O55203 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb2O55203 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.34■□□□□ 0.53
Ldb2O55203 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ldb2O55203 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb2O55203 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb2O55203 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ldb2O55203 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb2O55203 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb2O55203 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.33■□□□□ 0.52
Ldb2O55203 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.33■□□□□ 0.52
Ldb2O55203 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.33■□□□□ 0.52
Ldb2O55203 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.33■□□□□ 0.52
Ldb2O55203 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Gm6365-201ENSMUST00000054711 744 ntBASIC18.33■□□□□ 0.52
Ldb2O55203 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb2O55203 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ldb2O55203 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ldb2O55203 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.32■□□□□ 0.52
Ldb2O55203 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ldb2O55203 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.32■□□□□ 0.52
Ldb2O55203 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ldb2O55203 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.32■□□□□ 0.52
Ldb2O55203 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.32■□□□□ 0.52
Ldb2O55203 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ldb2O55203 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb2O55203 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ldb2O55203 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.31■□□□□ 0.52
Ldb2O55203 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ldb2O55203 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Ldb2O55203 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb2O55203 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ldb2O55203 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Ldb2O55203 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ldb2O55203 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ldb2O55203 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ldb2O55203 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ldb2O55203 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms