Protein–RNA interactions for Protein: O55013

Trappc3, Trafficking protein particle complex subunit 3, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc3O55013 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trappc3O55013 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.78■□□□□ 0.76
Trappc3O55013 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Trappc3O55013 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.78■□□□□ 0.76
Trappc3O55013 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.78■□□□□ 0.76
Trappc3O55013 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.78■□□□□ 0.76
Trappc3O55013 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.78■□□□□ 0.76
Trappc3O55013 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.78■□□□□ 0.76
Trappc3O55013 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Trappc3O55013 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trappc3O55013 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.78■□□□□ 0.76
Trappc3O55013 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trappc3O55013 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trappc3O55013 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.77■□□□□ 0.76
Trappc3O55013 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trappc3O55013 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trappc3O55013 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trappc3O55013 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trappc3O55013 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trappc3O55013 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trappc3O55013 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.76■□□□□ 0.75
Trappc3O55013 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trappc3O55013 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trappc3O55013 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trappc3O55013 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trappc3O55013 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Gm13148-201ENSMUST00000118892 745 ntBASIC19.75■□□□□ 0.75
Trappc3O55013 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 BC021767-201ENSMUST00000126387 1716 ntBASIC19.75■□□□□ 0.75
Trappc3O55013 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trappc3O55013 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Trappc3O55013 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trappc3O55013 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.75■□□□□ 0.75
Trappc3O55013 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trappc3O55013 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trappc3O55013 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trappc3O55013 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trappc3O55013 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.74■□□□□ 0.75
Trappc3O55013 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.74■□□□□ 0.75
Trappc3O55013 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.74■□□□□ 0.75
Trappc3O55013 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trappc3O55013 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Trappc3O55013 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.73■□□□□ 0.75
Trappc3O55013 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.73■□□□□ 0.75
Trappc3O55013 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.73■□□□□ 0.75
Trappc3O55013 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.73■□□□□ 0.75
Trappc3O55013 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trappc3O55013 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trappc3O55013 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trappc3O55013 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trappc3O55013 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.72■□□□□ 0.75
Trappc3O55013 Gm5408-201ENSMUST00000197998 747 ntBASIC19.72■□□□□ 0.75
Trappc3O55013 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Trappc3O55013 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trappc3O55013 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trappc3O55013 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms