Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.71■□□□□ 0.75
Kcnu1O54982 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Kcnu1O54982 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.7■□□□□ 0.74
Kcnu1O54982 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Kcnu1O54982 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.7■□□□□ 0.74
Kcnu1O54982 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Kcnu1O54982 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Kcnu1O54982 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnu1O54982 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.69■□□□□ 0.74
Kcnu1O54982 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Gm10493-201ENSMUST00000097270 612 ntBASIC19.69■□□□□ 0.74
Kcnu1O54982 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.69■□□□□ 0.74
Kcnu1O54982 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnu1O54982 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.69■□□□□ 0.74
Kcnu1O54982 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnu1O54982 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnu1O54982 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnu1O54982 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Kcnu1O54982 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.68■□□□□ 0.74
Kcnu1O54982 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.68■□□□□ 0.74
Kcnu1O54982 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.68■□□□□ 0.74
Kcnu1O54982 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnu1O54982 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnu1O54982 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnu1O54982 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.68■□□□□ 0.74
Kcnu1O54982 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Kcnu1O54982 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.67■□□□□ 0.74
Kcnu1O54982 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnu1O54982 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Kcnu1O54982 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Kcnu1O54982 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnu1O54982 Fst-202ENSMUST00000223640 2612 ntBASIC19.66■□□□□ 0.74
Kcnu1O54982 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.65■□□□□ 0.74
Kcnu1O54982 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.65■□□□□ 0.74
Kcnu1O54982 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.65■□□□□ 0.74
Kcnu1O54982 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.65■□□□□ 0.74
Kcnu1O54982 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnu1O54982 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.64■□□□□ 0.74
Kcnu1O54982 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Kcnu1O54982 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Kcnu1O54982 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.64■□□□□ 0.73
Kcnu1O54982 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.64■□□□□ 0.73
Kcnu1O54982 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcnu1O54982 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Kcnu1O54982 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.64■□□□□ 0.73
Kcnu1O54982 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcnu1O54982 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.64■□□□□ 0.73
Kcnu1O54982 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Kcnu1O54982 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.64■□□□□ 0.73
Kcnu1O54982 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcnu1O54982 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnu1O54982 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.63■□□□□ 0.73
Kcnu1O54982 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnu1O54982 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Kcnu1O54982 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Kcnu1O54982 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.63■□□□□ 0.73
Kcnu1O54982 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.63■□□□□ 0.73
Kcnu1O54982 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.63■□□□□ 0.73
Kcnu1O54982 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnu1O54982 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.63■□□□□ 0.73
Kcnu1O54982 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnu1O54982 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.63■□□□□ 0.73
Kcnu1O54982 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcnu1O54982 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms