Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc1a4O35874 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc1a4O35874 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Slc1a4O35874 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc1a4O35874 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a4O35874 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc1a4O35874 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc1a4O35874 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc1a4O35874 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slc1a4O35874 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Slc1a4O35874 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc1a4O35874 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Slc1a4O35874 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.66■■□□□ 1.06
Slc1a4O35874 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a4O35874 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Slc1a4O35874 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.65■■□□□ 1.06
Slc1a4O35874 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Slc1a4O35874 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a4O35874 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc1a4O35874 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc1a4O35874 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc1a4O35874 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a4O35874 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a4O35874 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.64■■□□□ 1.05
Slc1a4O35874 Gm12527-201ENSMUST00000117967 564 ntBASIC21.64■■□□□ 1.05
Slc1a4O35874 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.64■■□□□ 1.05
Slc1a4O35874 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a4O35874 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Slc1a4O35874 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a4O35874 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a4O35874 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a4O35874 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slc1a4O35874 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.62■■□□□ 1.05
Slc1a4O35874 Gm20049-201ENSMUST00000219950 730 ntBASIC21.62■■□□□ 1.05
Slc1a4O35874 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a4O35874 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.62■■□□□ 1.05
Slc1a4O35874 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.61■■□□□ 1.05
Slc1a4O35874 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Slc1a4O35874 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc1a4O35874 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.61■■□□□ 1.05
Slc1a4O35874 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.61■■□□□ 1.05
Slc1a4O35874 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc1a4O35874 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.61■■□□□ 1.05
Slc1a4O35874 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc1a4O35874 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc1a4O35874 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Slc1a4O35874 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.6■■□□□ 1.05
Slc1a4O35874 Gm10653-202ENSMUST00000139570 835 ntBASIC21.6■■□□□ 1.05
Slc1a4O35874 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Slc1a4O35874 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Slc1a4O35874 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Slc1a4O35874 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms