Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Matn3O35701 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Matn3O35701 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.75■□□□□ 0.27
Matn3O35701 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Matn3O35701 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Matn3O35701 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Serp2-204ENSMUST00000228055 705 ntBASIC16.75■□□□□ 0.27
Matn3O35701 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Matn3O35701 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Matn3O35701 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Matn3O35701 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.74■□□□□ 0.27
Matn3O35701 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Matn3O35701 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.74■□□□□ 0.27
Matn3O35701 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.74■□□□□ 0.27
Matn3O35701 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Matn3O35701 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.73■□□□□ 0.27
Matn3O35701 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.73■□□□□ 0.27
Matn3O35701 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Matn3O35701 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Matn3O35701 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Gm22238-201ENSMUST00000175222 88 ntBASIC16.72■□□□□ 0.27
Matn3O35701 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.72■□□□□ 0.27
Matn3O35701 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.72■□□□□ 0.27
Matn3O35701 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.72■□□□□ 0.27
Matn3O35701 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Matn3O35701 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Matn3O35701 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Matn3O35701 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Matn3O35701 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.7■□□□□ 0.26
Matn3O35701 Gm9847-201ENSMUST00000052528 599 ntBASIC16.7■□□□□ 0.26
Matn3O35701 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Matn3O35701 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.7■□□□□ 0.26
Matn3O35701 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Matn3O35701 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms