Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lhx8O35652 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.82■□□□□ 0.44
Lhx8O35652 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC17.82■□□□□ 0.44
Lhx8O35652 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lhx8O35652 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Lhx8O35652 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.82■□□□□ 0.44
Lhx8O35652 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lhx8O35652 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.81■□□□□ 0.44
Lhx8O35652 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.81■□□□□ 0.44
Lhx8O35652 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.81■□□□□ 0.44
Lhx8O35652 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.81■□□□□ 0.44
Lhx8O35652 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.81■□□□□ 0.44
Lhx8O35652 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lhx8O35652 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.8■□□□□ 0.44
Lhx8O35652 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.8■□□□□ 0.44
Lhx8O35652 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.8■□□□□ 0.44
Lhx8O35652 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.8■□□□□ 0.44
Lhx8O35652 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.8■□□□□ 0.44
Lhx8O35652 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Lhx8O35652 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lhx8O35652 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lhx8O35652 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.79■□□□□ 0.44
Lhx8O35652 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 Gm4968-201ENSMUST00000071458 858 ntBASIC17.79■□□□□ 0.44
Lhx8O35652 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.79■□□□□ 0.44
Lhx8O35652 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lhx8O35652 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lhx8O35652 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.78■□□□□ 0.44
Lhx8O35652 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lhx8O35652 Mir5133-201ENSMUST00000174955 77 ntBASIC17.78■□□□□ 0.44
Lhx8O35652 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lhx8O35652 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.78■□□□□ 0.44
Lhx8O35652 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC17.78■□□□□ 0.44
Lhx8O35652 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lhx8O35652 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Lhx8O35652 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.78■□□□□ 0.44
Lhx8O35652 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.78■□□□□ 0.44
Lhx8O35652 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lhx8O35652 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx8O35652 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx8O35652 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lhx8O35652 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lhx8O35652 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms