Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1i3O35627 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nr1i3O35627 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.87■□□□□ 0.77
Nr1i3O35627 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.87■□□□□ 0.77
Nr1i3O35627 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1i3O35627 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1i3O35627 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Nr1i3O35627 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nr1i3O35627 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.86■□□□□ 0.77
Nr1i3O35627 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.86■□□□□ 0.77
Nr1i3O35627 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.86■□□□□ 0.77
Nr1i3O35627 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.86■□□□□ 0.77
Nr1i3O35627 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.86■□□□□ 0.77
Nr1i3O35627 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nr1i3O35627 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nr1i3O35627 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1i3O35627 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1i3O35627 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1i3O35627 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.85■□□□□ 0.77
Nr1i3O35627 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.85■□□□□ 0.77
Nr1i3O35627 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1i3O35627 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.85■□□□□ 0.77
Nr1i3O35627 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.85■□□□□ 0.77
Nr1i3O35627 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nr1i3O35627 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.85■□□□□ 0.77
Nr1i3O35627 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.84■□□□□ 0.77
Nr1i3O35627 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nr1i3O35627 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Nr1i3O35627 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1i3O35627 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1i3O35627 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nr1i3O35627 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1i3O35627 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1i3O35627 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1i3O35627 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1i3O35627 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nr1i3O35627 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Nr1i3O35627 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.82■□□□□ 0.76
Nr1i3O35627 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.82■□□□□ 0.76
Nr1i3O35627 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Gm13234-201ENSMUST00000120010 747 ntBASIC19.82■□□□□ 0.76
Nr1i3O35627 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.82■□□□□ 0.76
Nr1i3O35627 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Nr1i3O35627 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nr1i3O35627 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Nr1i3O35627 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.81■□□□□ 0.76
Nr1i3O35627 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.81■□□□□ 0.76
Nr1i3O35627 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
Nr1i3O35627 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nr1i3O35627 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Nr1i3O35627 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nr1i3O35627 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1i3O35627 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1i3O35627 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nr1i3O35627 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1i3O35627 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Nr1i3O35627 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nr1i3O35627 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1i3O35627 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Nr1i3O35627 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1i3O35627 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1i3O35627 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms