Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.19■□□□□ 0.5
Slc1a6O35544 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Slc1a6O35544 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Slc1a6O35544 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc1a6O35544 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Smad6-203ENSMUST00000179458 273 ntBASIC18.18■□□□□ 0.5
Slc1a6O35544 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.18■□□□□ 0.5
Slc1a6O35544 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slc1a6O35544 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc1a6O35544 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc1a6O35544 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.17■□□□□ 0.5
Slc1a6O35544 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Slc1a6O35544 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc1a6O35544 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Slc1a6O35544 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc1a6O35544 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc1a6O35544 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.16■□□□□ 0.5
Slc1a6O35544 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Slc1a6O35544 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc1a6O35544 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Slc1a6O35544 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc1a6O35544 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc1a6O35544 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Slc1a6O35544 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Slc1a6O35544 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Slc1a6O35544 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc1a6O35544 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc1a6O35544 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc1a6O35544 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.14■□□□□ 0.49
Slc1a6O35544 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.14■□□□□ 0.49
Slc1a6O35544 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Gm9847-201ENSMUST00000052528 599 ntBASIC18.14■□□□□ 0.49
Slc1a6O35544 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slc1a6O35544 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slc1a6O35544 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc1a6O35544 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.13■□□□□ 0.49
Slc1a6O35544 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc1a6O35544 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc1a6O35544 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc1a6O35544 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc1a6O35544 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc1a6O35544 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Slc1a6O35544 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc1a6O35544 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.13■□□□□ 0.49
Slc1a6O35544 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc1a6O35544 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc1a6O35544 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc1a6O35544 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms