Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.65■□□□□ 0.42
Clk4O35493 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Clk4O35493 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Clk4O35493 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Clk4O35493 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Clk4O35493 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Clk4O35493 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Gm7290-201ENSMUST00000104990 617 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Gm12933-201ENSMUST00000120203 872 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Gm12918-201ENSMUST00000120234 636 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Gm15710-201ENSMUST00000121821 636 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Gm5075-201ENSMUST00000196916 622 ntBASIC17.64■□□□□ 0.41
Clk4O35493 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.64■□□□□ 0.41
Clk4O35493 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.64■□□□□ 0.41
Clk4O35493 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Clk4O35493 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Clk4O35493 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.63■□□□□ 0.41
Clk4O35493 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.63■□□□□ 0.41
Clk4O35493 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.63■□□□□ 0.41
Clk4O35493 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Clk4O35493 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Clk4O35493 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clk4O35493 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Clk4O35493 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
Clk4O35493 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clk4O35493 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Clk4O35493 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clk4O35493 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Clk4O35493 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.62■□□□□ 0.41
Clk4O35493 Gm37179-201ENSMUST00000194862 823 ntBASIC17.62■□□□□ 0.41
Clk4O35493 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.62■□□□□ 0.41
Clk4O35493 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clk4O35493 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clk4O35493 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clk4O35493 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clk4O35493 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Clk4O35493 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clk4O35493 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Gm6420-201ENSMUST00000193885 723 ntBASIC17.61■□□□□ 0.41
Clk4O35493 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.61■□□□□ 0.41
Clk4O35493 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Clk4O35493 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clk4O35493 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Clk4O35493 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clk4O35493 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk4O35493 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clk4O35493 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.6■□□□□ 0.41
Clk4O35493 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clk4O35493 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clk4O35493 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms