Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tnfsf11O35235 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.41□□□□□ -0.1
Tnfsf11O35235 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tnfsf11O35235 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tnfsf11O35235 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Tnfsf11O35235 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tnfsf11O35235 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.38□□□□□ -0.11
Tnfsf11O35235 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.38□□□□□ -0.11
Tnfsf11O35235 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tnfsf11O35235 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Tnfsf11O35235 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms