Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Gm10602-201ENSMUST00000098239 609 ntBASIC17.31■□□□□ 0.36
Cx3cl1O35188 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.31■□□□□ 0.36
Cx3cl1O35188 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cx3cl1O35188 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cx3cl1O35188 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Cx3cl1O35188 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cl1O35188 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cl1O35188 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.27■□□□□ 0.36
Cx3cl1O35188 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cx3cl1O35188 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cl1O35188 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cl1O35188 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cl1O35188 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Gm6211-202ENSMUST00000167849 925 ntBASIC17.26■□□□□ 0.35
Cx3cl1O35188 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.26■□□□□ 0.35
Cx3cl1O35188 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cl1O35188 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms