Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ebf3O08791 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Ebf3O08791 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Ebf3O08791 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf3O08791 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ebf3O08791 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Gm5643-201ENSMUST00000117081 966 ntBASIC19.11■□□□□ 0.65
Ebf3O08791 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.11■□□□□ 0.65
Ebf3O08791 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ebf3O08791 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf3O08791 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ebf3O08791 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.1■□□□□ 0.65
Ebf3O08791 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ebf3O08791 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.1■□□□□ 0.65
Ebf3O08791 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ebf3O08791 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Dio3-201ENSMUST00000097228 1449 ntBASIC19.09■□□□□ 0.65
Ebf3O08791 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.09■□□□□ 0.65
Ebf3O08791 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.09■□□□□ 0.65
Ebf3O08791 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ebf3O08791 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ebf3O08791 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf3O08791 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.08■□□□□ 0.65
Ebf3O08791 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf3O08791 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ebf3O08791 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.08■□□□□ 0.64
Ebf3O08791 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.08■□□□□ 0.64
Ebf3O08791 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ebf3O08791 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ebf3O08791 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.08■□□□□ 0.64
Ebf3O08791 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ebf3O08791 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
Ebf3O08791 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ebf3O08791 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ebf3O08791 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.07■□□□□ 0.64
Ebf3O08791 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ebf3O08791 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf3O08791 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Ebf3O08791 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ebf3O08791 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ebf3O08791 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.06■□□□□ 0.64
Ebf3O08791 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ebf3O08791 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.06■□□□□ 0.64
Ebf3O08791 Gm44549-201ENSMUST00000208351 577 ntBASIC19.06■□□□□ 0.64
Ebf3O08791 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.06■□□□□ 0.64
Ebf3O08791 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf3O08791 Rarb-207ENSMUST00000225921 2756 ntBASIC19.05■□□□□ 0.64
Ebf3O08791 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Ebf3O08791 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.05■□□□□ 0.64
Ebf3O08791 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.05■□□□□ 0.64
Ebf3O08791 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.05■□□□□ 0.64
Ebf3O08791 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ebf3O08791 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.05■□□□□ 0.64
Ebf3O08791 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf3O08791 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf3O08791 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf3O08791 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf3O08791 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ebf3O08791 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Ebf3O08791 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.04■□□□□ 0.64
Ebf3O08791 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms