Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
AlyrefO08583 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AlyrefO08583 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
AlyrefO08583 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
AlyrefO08583 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AlyrefO08583 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
AlyrefO08583 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.59■□□□□ 0.57
AlyrefO08583 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.59■□□□□ 0.57
AlyrefO08583 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
AlyrefO08583 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.59■□□□□ 0.57
AlyrefO08583 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AlyrefO08583 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AlyrefO08583 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AlyrefO08583 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.58■□□□□ 0.57
AlyrefO08583 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
AlyrefO08583 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
AlyrefO08583 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
AlyrefO08583 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
AlyrefO08583 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
AlyrefO08583 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.58■□□□□ 0.56
AlyrefO08583 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AlyrefO08583 Gm7063-201ENSMUST00000186840 981 ntBASIC18.58■□□□□ 0.56
AlyrefO08583 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
AlyrefO08583 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
AlyrefO08583 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
AlyrefO08583 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
AlyrefO08583 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.57■□□□□ 0.56
AlyrefO08583 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.57■□□□□ 0.56
AlyrefO08583 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.57■□□□□ 0.56
AlyrefO08583 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
AlyrefO08583 Gm12382-201ENSMUST00000122005 922 ntBASIC18.57■□□□□ 0.56
AlyrefO08583 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.57■□□□□ 0.56
AlyrefO08583 Gm18959-201ENSMUST00000208954 655 ntBASIC18.57■□□□□ 0.56
AlyrefO08583 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.57■□□□□ 0.56
AlyrefO08583 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
AlyrefO08583 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AlyrefO08583 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
AlyrefO08583 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
AlyrefO08583 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Gm28033-201ENSMUST00000184224 96 ntBASIC18.56■□□□□ 0.56
AlyrefO08583 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.56■□□□□ 0.56
AlyrefO08583 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
AlyrefO08583 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AlyrefO08583 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
AlyrefO08583 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.55■□□□□ 0.56
AlyrefO08583 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
AlyrefO08583 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AlyrefO08583 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.55■□□□□ 0.56
AlyrefO08583 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AlyrefO08583 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.55■□□□□ 0.56
AlyrefO08583 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.55■□□□□ 0.56
AlyrefO08583 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
AlyrefO08583 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.54■□□□□ 0.56
AlyrefO08583 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
AlyrefO08583 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AlyrefO08583 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms