Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Gm11539-201ENSMUST00000119837 557 ntBASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Gm13436-201ENSMUST00000120418 567 ntBASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Gm3375-201ENSMUST00000203929 796 ntBASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
B020004C17RikJ3QP07 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
B020004C17RikJ3QP07 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
B020004C17RikJ3QP07 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
B020004C17RikJ3QP07 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
B020004C17RikJ3QP07 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
B020004C17RikJ3QP07 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
B020004C17RikJ3QP07 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.77■□□□□ 0.91
B020004C17RikJ3QP07 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
B020004C17RikJ3QP07 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
B020004C17RikJ3QP07 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
B020004C17RikJ3QP07 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.75■□□□□ 0.91
B020004C17RikJ3QP07 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
B020004C17RikJ3QP07 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
B020004C17RikJ3QP07 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
B020004C17RikJ3QP07 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Gm12382-201ENSMUST00000122005 922 ntBASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
B020004C17RikJ3QP07 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
B020004C17RikJ3QP07 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
B020004C17RikJ3QP07 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
B020004C17RikJ3QP07 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
B020004C17RikJ3QP07 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Golph3-202ENSMUST00000226517 2359 ntBASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Gm7889-201ENSMUST00000185591 958 ntBASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
B020004C17RikJ3QP07 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
B020004C17RikJ3QP07 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
B020004C17RikJ3QP07 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
B020004C17RikJ3QP07 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms