Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav13d-3J3QMG8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav13d-3J3QMG8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Trav13d-3J3QMG8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav13d-3J3QMG8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13d-3J3QMG8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13d-3J3QMG8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav13d-3J3QMG8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13d-3J3QMG8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav13d-3J3QMG8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13d-3J3QMG8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13d-3J3QMG8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13d-3J3QMG8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13d-3J3QMG8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav13d-3J3QMG8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-3J3QMG8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav13d-3J3QMG8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13d-3J3QMG8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms