Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh11xF6ZNL5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh11xF6ZNL5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh11xF6ZNL5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh11xF6ZNL5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh11xF6ZNL5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh11xF6ZNL5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh11xF6ZNL5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh11xF6ZNL5 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh11xF6ZNL5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh11xF6ZNL5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh11xF6ZNL5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh11xF6ZNL5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdh11xF6ZNL5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh11xF6ZNL5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh11xF6ZNL5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdh11xF6ZNL5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.39■□□□□ 0.85
Pcdh11xF6ZNL5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh11xF6ZNL5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdh11xF6ZNL5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Gm10602-201ENSMUST00000098239 609 ntBASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh11xF6ZNL5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh11xF6ZNL5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms