Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raph1F2Z3U3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raph1F2Z3U3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raph1F2Z3U3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raph1F2Z3U3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raph1F2Z3U3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.33■□□□□ 0.53
Raph1F2Z3U3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Raph1F2Z3U3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raph1F2Z3U3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Raph1F2Z3U3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.32■□□□□ 0.52
Raph1F2Z3U3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Gm13241-201ENSMUST00000094493 780 ntBASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Raph1F2Z3U3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Raph1F2Z3U3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.3■□□□□ 0.52
Raph1F2Z3U3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Raph1F2Z3U3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Raph1F2Z3U3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms