Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Gm22325-201ENSMUST00000158904 308 ntBASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb9E9Q5G2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb9E9Q5G2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb9E9Q5G2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Gm10653-202ENSMUST00000139570 835 ntBASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdhb9E9Q5G2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb9E9Q5G2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb9E9Q5G2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb9E9Q5G2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pcdhb9E9Q5G2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdhb9E9Q5G2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhb9E9Q5G2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdhb9E9Q5G2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb9E9Q5G2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Gm12896-201ENSMUST00000118430 226 ntBASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Gm37856-201ENSMUST00000191634 999 ntBASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb9E9Q5G2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Dio3-201ENSMUST00000097228 1449 ntBASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Gm2559-201ENSMUST00000201323 363 ntBASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb9E9Q5G2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb9E9Q5G2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms