Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh17E9PXF0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Gm10252-201ENSMUST00000209541 832 ntBASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Gm10812-201ENSMUST00000099864 546 ntBASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdh17E9PXF0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Gm2559-201ENSMUST00000201323 363 ntBASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdh17E9PXF0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh17E9PXF0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Gm44549-201ENSMUST00000208351 577 ntBASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh17E9PXF0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh17E9PXF0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdh17E9PXF0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.08■□□□□ 0.33
Pcdh17E9PXF0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.08■□□□□ 0.33
Pcdh17E9PXF0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh17E9PXF0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Dio3-201ENSMUST00000097228 1449 ntBASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh17E9PXF0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh17E9PXF0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh17E9PXF0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms