Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.48■□□□□ 0.55
Gm28043E0CXC2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm28043E0CXC2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28043E0CXC2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28043E0CXC2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28043E0CXC2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Gm28043E0CXC2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms