Protein–RNA interactions for Protein: B8JJN0

Gm20547, Predicted gene 20547, mousemouse

Predictions only

Length 1,276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20547B8JJN0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm20547B8JJN0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm20547B8JJN0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm20547B8JJN0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Gm12527-201ENSMUST00000117967 564 ntBASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.67■□□□□ 0.42
Gm20547B8JJN0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Gm5408-201ENSMUST00000197998 747 ntBASIC17.66■□□□□ 0.42
Gm20547B8JJN0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm20547B8JJN0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm20547B8JJN0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms