Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Nespas-201ENSMUST00000143738 1083 ntBASIC20.42■□□□□ 0.86
Herc3A6H6S0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Gm7514-201ENSMUST00000209475 934 ntBASIC20.42■□□□□ 0.86
Herc3A6H6S0 Gm18671-201ENSMUST00000214826 683 ntBASIC20.42■□□□□ 0.86
Herc3A6H6S0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Herc3A6H6S0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.41■□□□□ 0.86
Herc3A6H6S0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Herc3A6H6S0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Herc3A6H6S0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Herc3A6H6S0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Herc3A6H6S0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
Herc3A6H6S0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.4■□□□□ 0.86
Herc3A6H6S0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.4■□□□□ 0.86
Herc3A6H6S0 Grk6-206ENSMUST00000224995 2971 ntBASIC20.4■□□□□ 0.86
Herc3A6H6S0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Herc3A6H6S0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.4■□□□□ 0.86
Herc3A6H6S0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Herc3A6H6S0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.39■□□□□ 0.85
Herc3A6H6S0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Herc3A6H6S0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.39■□□□□ 0.85
Herc3A6H6S0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herc3A6H6S0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herc3A6H6S0 Gm18284-201ENSMUST00000172604 624 ntBASIC20.38■□□□□ 0.85
Herc3A6H6S0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.38■□□□□ 0.85
Herc3A6H6S0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.38■□□□□ 0.85
Herc3A6H6S0 AV356131-201ENSMUST00000206201 750 ntBASIC20.38■□□□□ 0.85
Herc3A6H6S0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herc3A6H6S0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Herc3A6H6S0 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.38■□□□□ 0.85
Herc3A6H6S0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herc3A6H6S0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.38■□□□□ 0.85
Herc3A6H6S0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Herc3A6H6S0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Herc3A6H6S0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Herc3A6H6S0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Gm10849-201ENSMUST00000100397 618 ntBASIC20.36■□□□□ 0.85
Herc3A6H6S0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.36■□□□□ 0.85
Herc3A6H6S0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Herc3A6H6S0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.35■□□□□ 0.85
Herc3A6H6S0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.35■□□□□ 0.85
Herc3A6H6S0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms