Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 AC153889.1-201ENSMUST00000219257 330 ntBASIC9.85□□□□□ -0.83
Ubr4A2AN08 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.85□□□□□ -0.83
Ubr4A2AN08 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Gm27463-201ENSMUST00000183569 57 ntBASIC9.84□□□□□ -0.83
Ubr4A2AN08 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Gm27000-201ENSMUST00000182943 842 ntBASIC9.84□□□□□ -0.83
Ubr4A2AN08 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC9.84□□□□□ -0.83
Ubr4A2AN08 Gm18195-201ENSMUST00000207604 706 ntBASIC9.84□□□□□ -0.83
Ubr4A2AN08 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ubr4A2AN08 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Gm45560-201ENSMUST00000211492 1472 ntBASIC9.83□□□□□ -0.84
Ubr4A2AN08 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Vti1a-206ENSMUST00000225529 1244 ntBASIC9.83□□□□□ -0.84
Ubr4A2AN08 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Gm9013-201ENSMUST00000132939 882 ntBASIC9.83□□□□□ -0.84
Ubr4A2AN08 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ubr4A2AN08 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Gm15375-201ENSMUST00000119510 849 ntBASIC9.82□□□□□ -0.84
Ubr4A2AN08 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Gm8000-201ENSMUST00000188378 592 ntBASIC9.82□□□□□ -0.84
Ubr4A2AN08 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ubr4A2AN08 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC9.81□□□□□ -0.84
Ubr4A2AN08 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.81□□□□□ -0.84
Ubr4A2AN08 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ubr4A2AN08 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ubr4A2AN08 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms