Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IsxA1A546 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.13■□□□□ 0.33
IsxA1A546 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.13■□□□□ 0.33
IsxA1A546 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IsxA1A546 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.13■□□□□ 0.33
IsxA1A546 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.13■□□□□ 0.33
IsxA1A546 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.13■□□□□ 0.33
IsxA1A546 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IsxA1A546 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.12■□□□□ 0.33
IsxA1A546 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
IsxA1A546 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
IsxA1A546 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.12■□□□□ 0.33
IsxA1A546 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.12■□□□□ 0.33
IsxA1A546 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IsxA1A546 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
IsxA1A546 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
IsxA1A546 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.11■□□□□ 0.33
IsxA1A546 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IsxA1A546 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Gm22238-201ENSMUST00000175222 88 ntBASIC17.1■□□□□ 0.33
IsxA1A546 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.1■□□□□ 0.33
IsxA1A546 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IsxA1A546 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.1■□□□□ 0.33
IsxA1A546 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
IsxA1A546 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.09■□□□□ 0.33
IsxA1A546 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.09■□□□□ 0.33
IsxA1A546 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IsxA1A546 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.09■□□□□ 0.33
IsxA1A546 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
IsxA1A546 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.09■□□□□ 0.33
IsxA1A546 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
IsxA1A546 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IsxA1A546 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IsxA1A546 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IsxA1A546 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.08■□□□□ 0.33
IsxA1A546 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IsxA1A546 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
IsxA1A546 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.08■□□□□ 0.32
IsxA1A546 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.08■□□□□ 0.32
IsxA1A546 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Gm13241-201ENSMUST00000094493 780 ntBASIC17.08■□□□□ 0.32
IsxA1A546 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IsxA1A546 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms