Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Gm12821-201ENSMUST00000120022 600 ntBASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-1A0N8R1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.41■□□□□ 0.06
Trav12-1A0N8R1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-1A0N8R1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Gm26833-201ENSMUST00000180899 440 ntBASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Trav12-1A0N8R1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Gm38205-201ENSMUST00000192243 258 ntBASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Gm6139-201ENSMUST00000079261 882 ntBASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-1A0N8R1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav12-1A0N8R1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav12-1A0N8R1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms