Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb8A0A140LI48 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb8A0A140LI48 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb8A0A140LI48 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhgb8A0A140LI48 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Fst-202ENSMUST00000223640 2612 ntBASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhgb8A0A140LI48 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms