Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv19A0A0B4J1H4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv19A0A0B4J1H4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Grk6-206ENSMUST00000224995 2971 ntBASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm9988-201ENSMUST00000069786 435 ntBASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv19A0A0B4J1H4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trbv19A0A0B4J1H4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms