Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Trbv12-1A0A0B4J1H0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.33■□□□□ 0.21
Trbv12-1A0A0B4J1H0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Rab3c-203ENSMUST00000224180 967 ntBASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm10602-201ENSMUST00000098239 609 ntBASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv12-1A0A0B4J1H0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms