Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trbv15A0A0A6YYE3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv15A0A0A6YYE3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Golgb1-201ENSMUST00000023534 498 ntBASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv15A0A0A6YYE3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Spcs1-204ENSMUST00000226782 949 ntBASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv15A0A0A6YYE3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv15A0A0A6YYE3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Gm9959-201ENSMUST00000068277 390 ntBASIC15.27■□□□□ 0.04
Trbv15A0A0A6YYE3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv15A0A0A6YYE3 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.27■□□□□ 0.03
Trbv15A0A0A6YYE3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms