Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-42A0A0A6YY38 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-42A0A0A6YY38 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Mir6982-201ENSMUST00000184354 68 ntBASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-42A0A0A6YY38 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-42A0A0A6YY38 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Zfp783-201ENSMUST00000095946 670 ntBASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-42A0A0A6YY38 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-42A0A0A6YY38 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.02■□□□□ 0.31
Ighv1-42A0A0A6YY38 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-42A0A0A6YY38 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-42A0A0A6YY38 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ighv1-42A0A0A6YY38 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-42A0A0A6YY38 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms