Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav21-dv12A0A075B6C4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm38205-201ENSMUST00000192243 258 ntBASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav21-dv12A0A075B6C4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav21-dv12A0A075B6C4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav21-dv12A0A075B6C4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav21-dv12A0A075B6C4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm9988-201ENSMUST00000069786 435 ntBASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms