Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-4A0A075B6B4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-4A0A075B6B4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav6-4A0A075B6B4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-4A0A075B6B4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav6-4A0A075B6B4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trav6-4A0A075B6B4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-4A0A075B6B4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-4A0A075B6B4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-4A0A075B6B4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Gm7291-201ENSMUST00000199147 382 ntBASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-4A0A075B6B4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-4A0A075B6B4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms