Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9d-3A0A075B695 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9d-3A0A075B695 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9d-3A0A075B695 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav9d-3A0A075B695 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-3A0A075B695 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav9d-3A0A075B695 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms