Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-7-dv9A0A075B639 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-7-dv9A0A075B639 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-7-dv9A0A075B639 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-7-dv9A0A075B639 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm42778-201ENSMUST00000199644 553 ntBASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm10493-201ENSMUST00000097270 612 ntBASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav6-7-dv9A0A075B639 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-7-dv9A0A075B639 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6-7-dv9A0A075B639 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6-7-dv9A0A075B639 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-7-dv9A0A075B639 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms