Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav16nA0A075B634 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav16nA0A075B634 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16nA0A075B634 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16nA0A075B634 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16nA0A075B634 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16nA0A075B634 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav16nA0A075B634 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav16nA0A075B634 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.94□□□□□ -0.18
Trav16nA0A075B634 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.94□□□□□ -0.18
Trav16nA0A075B634 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav16nA0A075B634 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms