Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-1-dv6d-1A0A075B624 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm43137-201ENSMUST00000198052 594 ntBASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm11421-201ENSMUST00000122124 294 ntBASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav15d-1-dv6d-1A0A075B624 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms