Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trbv4A0A075B5I2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Nespas-201ENSMUST00000143738 1083 ntBASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Gm7514-201ENSMUST00000209475 934 ntBASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv4A0A075B5I2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv4A0A075B5I2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv4A0A075B5I2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv4A0A075B5I2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv4A0A075B5I2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Trbv4A0A075B5I2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trbv4A0A075B5I2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv4A0A075B5I2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Gm18284-201ENSMUST00000172604 624 ntBASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trbv4A0A075B5I2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 AV356131-201ENSMUST00000206201 750 ntBASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv4A0A075B5I2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv4A0A075B5I2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Trbv4A0A075B5I2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms