Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm13542-201ENSMUST00000118484 637 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm10224-201ENSMUST00000119496 615 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm12313-201ENSMUST00000121347 421 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Mup-ps22-201ENSMUST00000121611 243 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm16210-201ENSMUST00000122161 610 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Uba52-206ENSMUST00000135446 520 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 4933406J10Rik-201ENSMUST00000144828 963 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm22636-201ENSMUST00000158142 275 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm20447-201ENSMUST00000173290 599 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 n-R5s101-201ENSMUST00000177910 119 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 n-R5s114-201ENSMUST00000178297 119 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 n-R5s119-201ENSMUST00000178861 119 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 n-R5s127-201ENSMUST00000179185 119 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 n-R5s129-201ENSMUST00000180122 119 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 n-R5s131-201ENSMUST00000180280 119 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm6931-202ENSMUST00000183137 1009 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm37155-201ENSMUST00000192152 406 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm37770-201ENSMUST00000192855 772 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Ighv1-33-201ENSMUST00000193220 350 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm8850-201ENSMUST00000195316 588 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm43476-201ENSMUST00000197873 405 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm42824-201ENSMUST00000199361 247 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm42821-201ENSMUST00000199771 489 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Prb3-ps-201ENSMUST00000204675 1111 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm45554-201ENSMUST00000210731 1004 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 AC167202.2-201ENSMUST00000220155 296 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 AC129208.2-201ENSMUST00000228506 320 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm16410-201ENSMUST00000094550 774 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Zfp57-212ENSMUST00000174672 2597 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim39Q9ESN2 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC7.73□□□□□ -1.17
Trim39Q9ESN2 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm5120-201ENSMUST00000215231 2414 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm19683-201ENSMUST00000209748 1781 ntBASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim39Q9ESN2 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 126.4 ms