Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm13726-201ENSMUST00000121278 794 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm10086-201ENSMUST00000136334 354 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm24768-201ENSMUST00000158512 94 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm23022-201ENSMUST00000158768 180 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm25947-201ENSMUST00000180343 110 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm5350-201ENSMUST00000182057 1002 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm29240-201ENSMUST00000187248 286 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm18181-201ENSMUST00000190670 736 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm3257-201ENSMUST00000207217 675 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm7639-201ENSMUST00000212608 484 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 AC154307.1-201ENSMUST00000214799 90 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 AC118733.1-201ENSMUST00000217387 1217 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm5654-201ENSMUST00000217787 475 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm18619-201ENSMUST00000222722 1147 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 AC241621.1-201ENSMUST00000224499 430 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 AC157572.4-201ENSMUST00000228203 549 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm24143-201ENSMUST00000082633 145 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 AC159379.2-201ENSMUST00000220244 2482 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm9776-201ENSMUST00000059598 2980 ntBASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ube3bQ9ES34 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Vmn1r193-203ENSMUST00000227562 6840 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm42615-201ENSMUST00000197704 1820 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm12667-201ENSMUST00000118299 1332 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm24334-201ENSMUST00000104210 128 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Btnl10-203ENSMUST00000108818 1028 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm12124-201ENSMUST00000120504 679 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm14411-201ENSMUST00000121798 914 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm15079-201ENSMUST00000121943 216 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm1947-201ENSMUST00000122451 910 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm20462-201ENSMUST00000172623 408 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm18296-201ENSMUST00000192475 783 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Mir7230-201ENSMUST00000195977 56 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Btnl10-201ENSMUST00000020792 1028 ntTSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 AC140451.1-201ENSMUST00000227984 737 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 AC137950.1-201ENSMUST00000228553 515 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Zfp939-201ENSMUST00000061201 2131 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Gm10805-201ENSMUST00000099710 399 ntBASIC9.66□□□□□ -0.86
Ube3bQ9ES34 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms