Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm33778-201ENSMUST00000216884 704 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 AC172027.1-201ENSMUST00000217659 337 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC7.25□□□□□ -1.25
Sf3a3Q9D554 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Sf3a3Q9D554 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm21781-201ENSMUST00000178920 4838 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 n-R5s90-201ENSMUST00000103968 118 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm22438-201ENSMUST00000104049 132 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm14056-201ENSMUST00000117198 642 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm13542-201ENSMUST00000118484 637 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm13700-201ENSMUST00000118624 1128 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm13333-201ENSMUST00000119424 781 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm11343-201ENSMUST00000120579 599 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm22262-201ENSMUST00000158713 86 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Mir6999-201ENSMUST00000183498 61 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm17867-201ENSMUST00000188981 391 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm43247-201ENSMUST00000198638 481 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm45283-201ENSMUST00000210593 628 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Olfr890-201ENSMUST00000079804 945 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm44509-201ENSMUST00000205400 1324 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 AC125074.1-201ENSMUST00000227970 1331 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Sf3a3Q9D554 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.23□□□□□ -1.25
Sf3a3Q9D554 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.23□□□□□ -1.25
Sf3a3Q9D554 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms