Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm24462-201ENSMUST00000102430 106 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm11809-201ENSMUST00000120923 950 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm24011-201ENSMUST00000157732 268 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm7031-201ENSMUST00000173709 919 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm44833-201ENSMUST00000208368 331 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm6909-201ENSMUST00000209825 989 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Arhgef33-207ENSMUST00000224966 490 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Mir135b-201ENSMUST00000083501 97 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Fv1-201ENSMUST00000094481 1380 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm38147-201ENSMUST00000192397 1798 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.92□□□□□ -1.3
Use1Q9CQ56 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Use1Q9CQ56 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm12365-201ENSMUST00000117931 568 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm11945-201ENSMUST00000120551 476 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm11188-201ENSMUST00000122382 388 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm3611-201ENSMUST00000173687 877 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm24307-201ENSMUST00000178512 101 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.91□□□□□ -1.3
Use1Q9CQ56 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Use1Q9CQ56 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.9□□□□□ -1.3
Use1Q9CQ56 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Use1Q9CQ56 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.9□□□□□ -1.3
Use1Q9CQ56 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms