Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nkx6-1Q99MA9 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nkx6-1Q99MA9 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nkx6-1Q99MA9 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
Nkx6-1Q99MA9 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Nkx6-1Q99MA9 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 AC165260.6-201ENSMUST00000225447 1735 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm43376-201ENSMUST00000198939 1887 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Rfx3-208ENSMUST00000174850 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm12535-201ENSMUST00000121025 484 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm23082-201ENSMUST00000157852 133 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 n-R5s115-201ENSMUST00000179019 119 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-7-201ENSMUST00000180364 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm12117-201ENSMUST00000183831 456 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm7560-201ENSMUST00000187748 873 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-6-201ENSMUST00000196127 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-12-201ENSMUST00000197274 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-5-201ENSMUST00000197439 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-10-201ENSMUST00000197745 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-11-201ENSMUST00000197952 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-4-201ENSMUST00000198665 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm4873-201ENSMUST00000199402 1203 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-9-201ENSMUST00000200087 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir669a-8-201ENSMUST00000200268 87 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 AC168880.1-201ENSMUST00000225113 707 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 AC131997.2-201ENSMUST00000227452 362 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 n-R5s193-201ENSMUST00000082864 109 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir135b-201ENSMUST00000083501 97 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Mir146b-201ENSMUST00000093619 109 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm16465-201ENSMUST00000118585 1758 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm38249-201ENSMUST00000192560 2321 ntBASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Nkx6-1Q99MA9 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Gm28989-201ENSMUST00000187867 1613 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 AC132474.1-201ENSMUST00000214407 3686 ntBASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Nkx6-1Q99MA9 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms