Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm23529-201ENSMUST00000104562 132 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm5754-201ENSMUST00000118774 892 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm16523-201ENSMUST00000121253 592 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm11349-201ENSMUST00000122209 1116 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm6838-201ENSMUST00000172851 582 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm9286-201ENSMUST00000173586 508 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm43013-201ENSMUST00000198216 247 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm4410-201ENSMUST00000199349 686 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm8703-201ENSMUST00000203793 730 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm7443-201ENSMUST00000206355 378 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm10688-201ENSMUST00000214985 520 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 AC192091.1-201ENSMUST00000218668 439 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm40853-201ENSMUST00000221342 582 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm9255-201ENSMUST00000223225 581 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 AL590616.1-201ENSMUST00000223339 574 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 AC139323.1-201ENSMUST00000223370 1040 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Mir24-2-201ENSMUST00000083607 107 ntBASIC7.15□□□□□ -1.26
Clrn1Q8K445 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clrn1Q8K445 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.15□□□□□ -1.27
Clrn1Q8K445 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.15□□□□□ -1.27
Clrn1Q8K445 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC7.15□□□□□ -1.27
Clrn1Q8K445 Gm45182-201ENSMUST00000207579 2404 ntBASIC7.15□□□□□ -1.27
Clrn1Q8K445 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm24462-201ENSMUST00000102430 106 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Gm25167-201ENSMUST00000104188 120 ntBASIC7.14□□□□□ -1.27
Clrn1Q8K445 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clrn1Q8K445 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms