Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr554-203ENSMUST00000215995 2515 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Gm46992-201ENSMUST00000222120 1389 ntBASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Pcdhb7Q8CDY9 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Prg4-202ENSMUST00000111901 3495 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Rasgrp1-205ENSMUST00000173541 2283 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm18637-201ENSMUST00000217665 1900 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm16575-201ENSMUST00000162186 1615 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm37409-201ENSMUST00000195811 1626 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43609-201ENSMUST00000199084 2712 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm25000-201ENSMUST00000117016 114 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm15580-201ENSMUST00000121587 556 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm24298-201ENSMUST00000158299 60 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm19560-201ENSMUST00000177510 514 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm27353-201ENSMUST00000184712 122 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm18727-201ENSMUST00000185981 553 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm28655-201ENSMUST00000191538 692 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ighv1-33-201ENSMUST00000193220 350 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm3745-201ENSMUST00000193773 421 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm38358-201ENSMUST00000195144 428 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm9236-201ENSMUST00000196892 587 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43580-201ENSMUST00000202892 284 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 AC124577.1-201ENSMUST00000214044 487 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm32220-201ENSMUST00000218420 298 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 AC132121.1-201ENSMUST00000220774 332 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 AC154838.1-201ENSMUST00000228944 911 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm6304-201ENSMUST00000096579 447 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm15834-201ENSMUST00000129740 2097 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm28451-201ENSMUST00000189311 2560 ntBASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Pcdhb7Q8CDY9 Gm10997-201ENSMUST00000210294 1500 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms